Search found 4 matches

by emmadej
October 24th, 2014, 6:03 pm
Forum: 2015 Lab Events
Topic: Protein Modeling C
Replies: 176
Views: 42923

Re: Protein Modeling C

The tuber is 278 cm, and if each amino acid is 2 cm then it will represent 139 amino acids. Each endcap is appoximately 2 cm long and therefore will cover a total of 4 cm when placed on the model, leaving 274 cm to work with. That is enough to represent 137 amino acids and the 2 end amino acids, wh...
by emmadej
October 23rd, 2014, 2:22 pm
Forum: 2015 Lab Events
Topic: Protein Modeling C
Replies: 176
Views: 42923

Re: Protein Modeling C

Both caps count as one amino acid I believe. That way when you mark the 2 cm lengths you end up with 140 amino acids, even though you have only 278 cm to work with. The pre-build visualization site includes both end amino acids 421 and 560. therefore including 140 amino acids. The tuber is 278 cm, ...
by emmadej
October 20th, 2014, 6:52 pm
Forum: 2015 Lab Events
Topic: Protein Modeling C
Replies: 176
Views: 42923

Re: Protein Modeling C

I don't seem to have that problem. I've attached a screenshot so you can see if we are doing the same thing. Yeah, I have typed in exactly that in addition to restrict *A and nothing happened. Someone suggested elsewhere I might be using a 'training model', but the JMOL I downloaded was off the web...
by emmadej
October 12th, 2014, 3:04 pm
Forum: 2015 Lab Events
Topic: Protein Modeling C
Replies: 176
Views: 42923

Re: Protein Modeling C

I have successfully gotten the endonuclease model into JMOL.

However, when i type in restrict 421-560, or select 421-560, it says 0 atoms selected.

How am I supposed to restrict it to the portion I am supposed to model?

:cry:

Go to advanced search