Search found 5 matches
- February 10th, 2020, 8:01 pm
- Forum: Protein Modeling C
- Topic: Protein Modeling C
- Replies: 162
- Views: 47366
Re: Protein Modeling C
Does anyone know how to display ions in Jmol? For example the central zinc atom in APOBEC3A? I came across a question on a test that asked the distance between the central iron atom and a proximal histidine at residue 93 in protein 1mbn.pdb. I tried commands such as select iron and select _fe and d...
- January 19th, 2020, 12:09 pm
- Forum: Protein Modeling C
- Topic: Protein Modeling C
- Replies: 162
- Views: 47366
Re: Protein Modeling C
Hey so for people prepping the Nats build for invitationals like MIT, was wondering what you guys were thinking/doing about BE4 seeing as it seems to include APOBEC1 rather than APOBEC3A (5keg) in it's sequence. is there a difference? structure might be the same/similar enough They’re very similar ...
- December 9th, 2019, 8:20 am
- Forum: Protein Modeling C
- Topic: Protein Modeling C
- Replies: 162
- Views: 47366
Re: Protein Modeling C
Try using ‘calculate hbonds’ instead.MacintoshJosh wrote: ↑December 9th, 2019, 5:48 am How would one find the amount of hydrogen bonds in a protein structure on Jmol? I try 'hbonds on' but nothing happens.
- December 4th, 2019, 2:15 pm
- Forum: Protein Modeling C
- Topic: Protein Modeling C
- Replies: 162
- Views: 47366
Re: Protein Modeling C
Could anyone explain what is expected for the nationals specific addition to the prebuild? My partners and I were confused as to what is actually meant by a "schematic representation" as it says in the rules for the fusion protein model.
- May 27th, 2019, 7:02 pm
- Forum: 2019 Nationals
- Topic: Who's going to Nationals? // 2019 Edition
- Replies: 92
- Views: 30867
Re: Who's going to Nationals? // 2019 Edition
Division C; Boca Raton Community High School; Florida; Chemistry Lab, Experimental Design, Fermi Questions, and Protein Modeling.