Protein Modeling C

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JoeyC
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Re: Protein Modeling C

Post by JoeyC »

Should I just be getting one protein chain (yes this was mentioned earlier, but that was about the CRISPR, not Anti-CRISPER protein)?
And of the chain, which part contains the nuclease?
And should I build the Viral RNA, Tracer and CRISPR RNA as side chains?
Thanks!
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Re: Protein Modeling C

Post by platypusomelette »

JoeyC wrote:Should I just be getting one protein chain (yes this was mentioned earlier, but that was about the CRISPR, not Anti-CRISPER protein)?
And of the chain, which part contains the nuclease?
And should I build the Viral RNA, Tracer and CRISPR RNA as side chains?
Thanks!
FYI "side chain" usually refers to the additions on amino acids, not pieces of protein, those would be something like "subunits" or "domains". I think it would be a good idea to build those additional parts as well
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Re: Protein Modeling C

Post by platypusomelette »

http://cbm.msoe.edu/modGallery/ScienceO ... ges/33.jpg

Anyone know if this is how they grade? What's that model he's holding, and where does that model come from? Also do any event supervisors here know exactly what the process of scoring is like?
island trash trees hs
anat: reg 4th
herp: reg 6th
genes: reg 5th
protein: reg 2nd
disease: reg 15th
fossils: reg 4th
2016: a&p 1st, fossils 3rd
2017: a&p 3rd, herp 14th
2018: a&p 1st, microbe 8th, herp 13th :/
pigeon YEA WE MADE STATES
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Re: Protein Modeling C

Post by JoeyC »

So do I build the Anti Crispr and Crispr or just the anti Crispr? :lol:
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Re: Protein Modeling C

Post by CookiePie1 »

JoeyC wrote:So do I build the Anti Crispr and Crispr or just the anti Crispr? :lol:
I believe it is just the Anti-CRISPR for the prebuild.
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Re: Protein Modeling C

Post by MacintoshJosh »

Why does typing "select hydrogen" show 0? Shouldn't there be hydrogen atoms in every amino acid?
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Re: Protein Modeling C

Post by meierfra »

Looking at the CRISPR page of the Wiki https://scioly.org/wiki/index.php/Prote ... ing/CRISPR, it says the Anti-CRISPR pre-build is pdb ID 5xn4. The rules clarification says it's 5vw1. The Wiki page is wrong? Are those other CRISPR IDs correct?
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Re: Protein Modeling C

Post by Unome »

meierfra wrote:Looking at the CRISPR page of the Wiki https://scioly.org/wiki/index.php/Prote ... ing/CRISPR, it says the Anti-CRISPR pre-build is pdb ID 5xn4. The rules clarification says it's 5vw1. The Wiki page is wrong? Are those other CRISPR IDs correct?
I don't know the details, but I would assume the rules clarification is accurate.
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Jmol/Smol program

Post by LowBlue1 »

Do we need to have this software downloaded on our computers?
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Re: Protein Modeling

Post by Unome »

LowBlue1 wrote:Do we need to have this software downloaded on our computers?
Jmol/Smol is useful to have downloaded to help you understand it. It's not technically required, but I can't see a team doing very well without having it. Although, I think it's browser-based as well.
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